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## C

calcBounds() - Method in class nl.liacs.subdisc.VisualArc
calcCDF(double) - Method in class nl.liacs.subdisc.NormalDistribution
calcErf(double) - Method in class nl.liacs.subdisc.NormalDistribution
calcPDF(double) - Method in class nl.liacs.subdisc.NormalDistribution
calculate(int, int) - Method in class nl.liacs.subdisc.QualityMeasure
  Contingency table:

  B B
  H n(HB) n(HB) n(H)
  H n(HB) n(HB) n(H)
  n(B) n(B) N

calculate(int, int, int, int, int) - Static method in class nl.liacs.subdisc.QualityMeasure
calculate(int, float, float, float, float, int[]) - Method in class nl.liacs.subdisc.QualityMeasure
calculate(Subgroup) - Method in class nl.liacs.subdisc.QualityMeasure
calculate(Subgroup) - Method in class nl.liacs.subdisc.RegressionMeasure
calculateConditionalEntropy(float, float) - Static method in class nl.liacs.subdisc.QualityMeasure
  Calculates the ConditionalEntropy.
calculateEditDistance(DAG) - Method in class nl.liacs.subdisc.QualityMeasure
calculateEntropy(float, float) - Static method in class nl.liacs.subdisc.QualityMeasure
calculateInformationGain(float, float, float, float) - Static method in class nl.liacs.subdisc.QualityMeasure
Candidate - Class in nl.liacs.subdisc
Candidate(Subgroup) - Constructor for class nl.liacs.subdisc.Candidate
CandidateQueue - Class in nl.liacs.subdisc
  A CandidateQueue holds a collection of `Candidate`s for future processing.
CandidateQueue(SearchParameters, Candidate) - Constructor for class nl.liacs.subdisc.CandidateQueue
check(NumericOperators, int) - Static method in enum nl.liacs.subdisc.NumericOperators
CHI2_TEST - Static variable in class nl.liacs.subdisc.QualityMeasure
CHI_SQUARED - Static variable in class nl.liacs.subdisc.QualityMeasure
chol() - Method in class nl.liacs.subdisc.Jama.Matrix
  Cholesky Decomposition
CholeskyDecomposition - Class in nl.liacs.subdisc.Jama
  Cholesky Decomposition.
CholeskyDecomposition(Matrix) - Constructor for class nl.liacs.subdisc.Jama.CholeskyDecomposition
  Cholesky algorithm for symmetric and positive definite matrix.
clearResult() - Method in class nl.liacs.subdisc.SubgroupDiscovery
climb() - Method in class nl.liacs.subdisc.Bayesian
clone() - Method in class nl.liacs.subdisc.Jama.Matrix
  Clone the Matrix object.
closeFileOutputStreams() - Static method in class nl.liacs.subdisc.Log
Column - Class in nl.liacs.subdisc
  A Column contains all data from a column read from a `File` or database.
Column(String, String, AttributeType, int, int) - Constructor for class nl.liacs.subdisc.Column
Column(Node) - Constructor for class nl.liacs.subdisc.Column
columnNr - Variable in enum nl.liacs.subdisc.gui.MetaDataTableModel.MetaDataTableHeader
COMMANDLINELOG - Static variable in class nl.liacs.subdisc.Log
compareEMValues(double, double) - Static method in class nl.liacs.subdisc.CorrelationMeasure
  TODO: Make use of CorrelationMeasure being comparable
compareTo(Candidate) - Method in class nl.liacs.subdisc.Candidate
compareTo(Condition) - Method in class nl.liacs.subdisc.Condition
compareTo(CorrelationMeasure) - Method in class nl.liacs.subdisc.CorrelationMeasure
compareTo(Subgroup) - Method in class nl.liacs.subdisc.Subgroup
computeBDeuFaster() - Method in class nl.liacs.subdisc.BinaryTable
computeCorrelationDistance() - Method in class nl.liacs.subdisc.CorrelationMeasure
  Computes the difference between the correlations of this subset and its complement
computeCoverCount(SubgroupSet, int) - Method in class nl.liacs.subdisc.SubgroupSet
  Computes the cover count of a particular example: the number of times this example is a member of a subgroup See van Leeuwen & Knobbe, ECML PKDD 2011
computeEmpiricalPValue(double[], SubgroupSet) - Method in class nl.liacs.subdisc.Validation
computeEntropy() - Method in class nl.liacs.subdisc.CorrelationMeasure
  The correlation distance between the subset and its complement is weighted with the entropy.
computeMedian(int, int) - Method in class nl.liacs.subdisc.NumericDomain
computeMedian(float[]) - Method in class nl.liacs.subdisc.NumericDomain
computeMedianAD(int, int) - Method in class nl.liacs.subdisc.NumericDomain
computeMedianFrequencyCounts(float, int, int) - Method in class nl.liacs.subdisc.NumericDomain
computeMultiplicativeWeight(SubgroupSet, Subgroup) - Method in class nl.liacs.subdisc.SubgroupSet
  Computes the multiplicative weight of a subgroup \n See van Leeuwen & Knobbe, ECML PKDD 2011.
computeSum(int, int) - Method in class nl.liacs.subdisc.NumericDomain
computeSumSquaredDeviations(int, int) - Method in class nl.liacs.subdisc.NumericDomain
cond() - Method in class nl.liacs.subdisc.Jama.Matrix
  Matrix condition (2 norm)
cond() - Method in class nl.liacs.subdisc.Jama.SingularValueDecomposition
  Two norm condition number
Condition - Class in nl.liacs.subdisc
Condition(Column) - Constructor for class nl.liacs.subdisc.Condition
Condition(Column, int) - Constructor for class nl.liacs.subdisc.Condition
ConditionList - Class in nl.liacs.subdisc
ConditionList() - Constructor for class nl.liacs.subdisc.ConditionList
connect(int, int) - Method in class nl.liacs.subdisc.DAGView
constructWithCopy(double[][]) - Static method in class nl.liacs.subdisc.Jama.Matrix
  Construct a matrix from a copy of a 2-D array.
containsFromShape(MShape) - Method in class nl.liacs.subdisc.VisualArc
COOKS_DISTANCE - Static variable in class nl.liacs.subdisc.QualityMeasure
copy() - Method in class nl.liacs.subdisc.Column
copy() - Method in class nl.liacs.subdisc.Condition
copy() - Method in class nl.liacs.subdisc.ConditionList
copy() - Method in class nl.liacs.subdisc.Jama.Matrix
  Make a deep copy of a matrix
copy() - Method in class nl.liacs.subdisc.Subgroup
CORRELATION - Static variable in class nl.liacs.subdisc.QualityMeasure
CORRELATION_DISTANCE - Static variable in class nl.liacs.subdisc.QualityMeasure
CORRELATION_ENTROPY - Static variable in class nl.liacs.subdisc.QualityMeasure
CORRELATION_P - Static variable in class nl.liacs.subdisc.QualityMeasure
CORRELATION_R - Static variable in class nl.liacs.subdisc.QualityMeasure
CORRELATION_R_NEG - Static variable in class nl.liacs.subdisc.QualityMeasure
CORRELATION_R_NEG_SQ - Static variable in class nl.liacs.subdisc.QualityMeasure
CORRELATION_R_SQ - Static variable in class nl.liacs.subdisc.QualityMeasure
CorrelationMeasure - Class in nl.liacs.subdisc
CorrelationMeasure(int, Column, Column) - Constructor for class nl.liacs.subdisc.CorrelationMeasure
CorrelationMeasure(CorrelationMeasure) - Constructor for class nl.liacs.subdisc.CorrelationMeasure
countCrossCube() - Method in class nl.liacs.subdisc.BinaryTable
countValues(int, String) - Method in class nl.liacs.subdisc.Table
COVERAGE - Static variable in class nl.liacs.subdisc.QualityMeasure
covers(int) - Method in class nl.liacs.subdisc.Subgroup
createTestSets() - Method in class nl.liacs.subdisc.CrossValidation
  Generates k test sets for cross-validation.
CrossCube - Class in nl.liacs.subdisc
CrossCube(int) - Constructor for class nl.liacs.subdisc.CrossCube
CrossTableWindow - Class in nl.liacs.subdisc.gui
CrossTableWindow(Dataset) - Constructor for class nl.liacs.subdisc.gui.CrossTableWindow
CrossValidation - Class in nl.liacs.subdisc
CrossValidation(int, int) - Constructor for class nl.liacs.subdisc.CrossValidation
Cui2LineNrMap - Class in nl.liacs.subdisc.cui
Cui2LineNrMap(File) - Constructor for class nl.liacs.subdisc.cui.Cui2LineNrMap
CUI2NAME - Static variable in interface nl.liacs.subdisc.cui.CuiMapInterface
Cui2NameMap - Class in nl.liacs.subdisc.cui
Cui2NameMap(File) - Constructor for class nl.liacs.subdisc.cui.Cui2NameMap
CUI_DIR - Static variable in interface nl.liacs.subdisc.cui.CuiMapInterface
CuiDomainChooser - Class in nl.liacs.subdisc.gui
CuiDomainChooser() - Constructor for class nl.liacs.subdisc.gui.CuiDomainChooser
CuiMapInterface - Interface in nl.liacs.subdisc.cui
currentLevelQueueSize() - Method in class nl.liacs.subdisc.CandidateQueue
  Returns the number of `Candidate`s in the current queue level of this CandidateQueue.

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