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## S

save(SubgroupSet, String) - Static method in class nl.liacs.subdisc.XMLAutoRun
saveAsSQL - Class in nl.liacs.subdisc
saveAsSQL() - Constructor for class nl.liacs.subdisc.saveAsSQL
saveDocument(Document, File) - Static method in class nl.liacs.subdisc.XMLDocument
saveExtent(BufferedWriter, Table, BitSet, TargetConcept) - Method in class nl.liacs.subdisc.SubgroupSet
saveSQLViewsToFile(String) - Method in class nl.liacs.subdisc.saveAsSQL
SearchParameters - Class in nl.liacs.subdisc
  SearchParameters contains all search parameters for an experiment.
SearchParameters(Node) - Constructor for class nl.liacs.subdisc.SearchParameters
SearchParameters() - Constructor for class nl.liacs.subdisc.SearchParameters
SearchStrategy - Enum in nl.liacs.subdisc
  SearchStrategy contains all available search strategies.
select(BitSet) - Method in class nl.liacs.subdisc.Column
  Creates a copy of the current column with some records removed.
select(BitSet) - Method in class nl.liacs.subdisc.Table
selectColumns(ItemSet) - Method in class nl.liacs.subdisc.BinaryTable
selectRows(BitSet) - Method in class nl.liacs.subdisc.BinaryTable
SelectStatement - Class in nl.liacs.subdisc
SelectStatement() - Constructor for class nl.liacs.subdisc.SelectStatement
SENSITIVITY - Static variable in class nl.liacs.subdisc.QualityMeasure
set(int, float) - Method in class nl.liacs.subdisc.Column
set(int, int, double) - Method in class nl.liacs.subdisc.Jama.Matrix
  Set a single element.
setAlpha(float) - Method in class nl.liacs.subdisc.SearchParameters
setBeta(float) - Method in class nl.liacs.subdisc.SearchParameters
setBounds(int, int, int, int) - Method in class nl.liacs.subdisc.VisualArc
setColor(boolean) - Method in class nl.liacs.subdisc.VisualNode
setColumn(BitSet, int) - Method in class nl.liacs.subdisc.BinaryTable
setCondition(Condition) - Method in class nl.liacs.subdisc.Refinement
setCount(BitSet, int) - Method in class nl.liacs.subdisc.CrossCube
setCount(int, int) - Method in class nl.liacs.subdisc.CrossCube
setDAG(DAG) - Method in class nl.liacs.subdisc.Subgroup
setDAGArea(int, int) - Method in class nl.liacs.subdisc.DAGView
setDescending() - Method in class nl.liacs.subdisc.SelectStatement
setEmpiricalPValue(double[]) - Method in class nl.liacs.subdisc.Subgroup
setID(int) - Method in class nl.liacs.subdisc.Subgroup
setIDs() - Method in class nl.liacs.subdisc.SubgroupSet
setIsEnabled(boolean) - Method in class nl.liacs.subdisc.Column
  Set whether this Column is enabled.
setLocation(double, double) - Method in class nl.liacs.subdisc.SubgroupROCPoint
  SubgroupROCPoint overrides the setLocation method of Point2D, because we do no allow the X/Y coordinates to be changed.
setLocation(int, int) - Method in class nl.liacs.subdisc.VisualNode
setMatrix(int, int, int, int, Matrix) - Method in class nl.liacs.subdisc.Jama.Matrix
  Set a submatrix.
setMatrix(int[], int[], Matrix) - Method in class nl.liacs.subdisc.Jama.Matrix
  Set a submatrix.
setMatrix(int[], int, int, Matrix) - Method in class nl.liacs.subdisc.Jama.Matrix
  Set a submatrix.
setMatrix(int, int, int[], Matrix) - Method in class nl.liacs.subdisc.Jama.Matrix
  Set a submatrix.
setMaximumCoverage(float) - Method in class nl.liacs.subdisc.SearchParameters
setMaximumSubgroups(int) - Method in class nl.liacs.subdisc.SearchParameters
setMaximumTime(float) - Method in class nl.liacs.subdisc.SearchParameters
setMeasureValue(double) - Method in class nl.liacs.subdisc.Subgroup
setMembers(BitSet) - Method in class nl.liacs.subdisc.Subgroup
setMinimumCoverage(int) - Method in class nl.liacs.subdisc.SearchParameters
setMissing(int) - Method in class nl.liacs.subdisc.Column
  Sets the bit at the specified position in the itsMissing BisSet.
setMultiTargets(List<Column>) - Method in class nl.liacs.subdisc.TargetConcept
setNewMissingValue(String) - Method in class nl.liacs.subdisc.Column
  Sets the new missing value for this Column.
setNrBins(int) - Method in class nl.liacs.subdisc.SearchParameters
setNrRecords(int) - Method in class nl.liacs.subdisc.BinaryTable
setNrTargetAttributes(int) - Method in class nl.liacs.subdisc.TargetConcept
setNumericOperators(String) - Method in class nl.liacs.subdisc.SearchParameters
setNumericStrategy(String) - Method in class nl.liacs.subdisc.SearchParameters
setPostProcessingCount(int) - Method in class nl.liacs.subdisc.SearchParameters
setPostProcessingDoAutoRun(boolean) - Method in class nl.liacs.subdisc.SearchParameters
setPrimaryTarget(Column) - Method in class nl.liacs.subdisc.TargetConcept
setPriority(double) - Method in class nl.liacs.subdisc.Candidate
setPValue(NormalDistribution) - Method in class nl.liacs.subdisc.Subgroup
setQualityMeasure(String) - Method in class nl.liacs.subdisc.SearchParameters
setQualityMeasure(int) - Method in class nl.liacs.subdisc.SearchParameters
setQualityMeasureMinimum(float) - Method in class nl.liacs.subdisc.SearchParameters
setSampleProperty(String) - Method in class nl.liacs.subdisc.DAGView
setSearchDepth(int) - Method in class nl.liacs.subdisc.SearchParameters
setSearchStrategy(String) - Method in class nl.liacs.subdisc.SearchParameters
setSearchStrategyWidth(int) - Method in class nl.liacs.subdisc.SearchParameters
setSecondaryTarget(Column) - Method in class nl.liacs.subdisc.TargetConcept
setSeparator(String) - Method in class nl.liacs.subdisc.FileLoaderTXT
setSize(int) - Method in class nl.liacs.subdisc.DataCube
setTargetConcept(TargetConcept) - Method in class nl.liacs.subdisc.SearchParameters
setTargetType(String) - Method in class nl.liacs.subdisc.TargetConcept
setTargetValue(String) - Method in class nl.liacs.subdisc.TargetConcept
setTitle() - Method in class nl.liacs.subdisc.gui.ResultWindow
setType(AttributeType) - Method in class nl.liacs.subdisc.Column
  Sets a new type for this Column.
setValue(String) - Method in class nl.liacs.subdisc.Condition
setValue(Object) - Method in class nl.liacs.subdisc.gui.RendererBoolean
setValue(Object) - Method in class nl.liacs.subdisc.gui.RendererNumber
shift(int, int) - Method in class nl.liacs.subdisc.VisualNode
SingularValueDecomposition - Class in nl.liacs.subdisc.Jama
  Singular Value Decomposition.
SingularValueDecomposition(Matrix) - Constructor for class nl.liacs.subdisc.Jama.SingularValueDecomposition
  Construct the singular value decomposition
size() - Method in class nl.liacs.subdisc.CandidateQueue
  Returns the total number of `Candidate`s in this CandidateQueue.
size() - Method in class nl.liacs.subdisc.Column
size() - Method in class nl.liacs.subdisc.NumericDomain
skipItemSets(int) - Method in class nl.liacs.subdisc.ItemSet
solve(Matrix) - Method in class nl.liacs.subdisc.Jama.CholeskyDecomposition
  Solve A*X = B
solve(Matrix) - Method in class nl.liacs.subdisc.Jama.LUDecomposition
  Solve A*X = B
solve(Matrix) - Method in class nl.liacs.subdisc.Jama.Matrix
  Solve A*X = B
solve(Matrix) - Method in class nl.liacs.subdisc.Jama.QRDecomposition
  Least squares solution of A*X = B
solveTranspose(Matrix) - Method in class nl.liacs.subdisc.Jama.Matrix
  Solve X*A = B, which is also A'*X' = B'
sort() - Method in class nl.liacs.subdisc.ConditionList
  Sorts this ConditionList according to 'natural' order of `Condition`s.
SPECIFICITY - Static variable in class nl.liacs.subdisc.QualityMeasure
SQLLOG - Static variable in class nl.liacs.subdisc.Log
SQLRESULTLOG - Static variable in class nl.liacs.subdisc.Log
stateChanged(ChangeEvent) - Method in class nl.liacs.subdisc.gui.HistogramWindow
SubDisc - Class in nl.liacs.subdisc.gui
SubDisc() - Constructor for class nl.liacs.subdisc.gui.SubDisc
Subgroup - Class in nl.liacs.subdisc
  A Subgroup contains a number of instances from the original data.
Subgroup(double, int, int, SubgroupSet) - Constructor for class nl.liacs.subdisc.Subgroup
  Creates a Subgroup.
Subgroup(ConditionList, BitSet, int) - Constructor for class nl.liacs.subdisc.Subgroup
  Creates a Subgroup, but for the Bayesian setting.
SubgroupDiscovery - Class in nl.liacs.subdisc
SubgroupDiscovery(SearchParameters, Table, int) - Constructor for class nl.liacs.subdisc.SubgroupDiscovery
SubgroupDiscovery(SearchParameters, Table, float) - Constructor for class nl.liacs.subdisc.SubgroupDiscovery
SubgroupDiscovery(SearchParameters, Table, boolean) - Constructor for class nl.liacs.subdisc.SubgroupDiscovery
SubgroupDiscovery(SearchParameters, Table) - Constructor for class nl.liacs.subdisc.SubgroupDiscovery
SubgroupROCPoint - Class in nl.liacs.subdisc
  A SubgroupROCPoint of a `Subgroup` is nothing more than a `Point2D. Float` with that Subgroups' `getID()` as identifier, `getFalsePositiveRate()` for `Point2D .x` and `getTruePositiveRate()` for `Point2D .y`.
SubgroupROCPoint(Subgroup) - Constructor for class nl.liacs.subdisc.SubgroupROCPoint
  Creates a SubgroupROCPoint for the `Subgroup` passed in as parameter.
SubgroupSet - Class in nl.liacs.subdisc
  A SubgroupSet is a `TreeSet` of `Subgroup`s.
SubgroupSet(int) - Constructor for class nl.liacs.subdisc.SubgroupSet
  Create a SubgroupSet of a certain size.
SubgroupSet(int, int, BitSet) - Constructor for class nl.liacs.subdisc.SubgroupSet
  Creates a SubgroupSet of a certain size, but in a nominal target setting theTotalCoverage and theBinaryTarget should also be set.
SubgroupSet(SubgroupSet) - Constructor for class nl.liacs.subdisc.SubgroupSet
  Creates a SubgroupSet just like the argument, except empty.
svd() - Method in class nl.liacs.subdisc.Jama.Matrix
  Singular Value Decomposition
SWAP_RANDOMIZATION - Static variable in class nl.liacs.subdisc.gui.RandomQualitiesWindow
swapRandomization(int) - Method in class nl.liacs.subdisc.Validation
  Swap randomizes the original `Table` and restores it to the original state afterwards.
swapRandomizeTarget(TargetConcept) - Method in class nl.liacs.subdisc.Table
symmetricDifference(ItemSet) - Method in class nl.liacs.subdisc.ItemSet

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